{ "_id": "6a203480cd65a98ecbd1129f", "Type": "Package", "Package": "iRfcb", "Title": "Tools for Managing Imaging FlowCytobot (IFCB) Data", "Version": "0.8.1.9000", "Authors@R": "c(\nperson(\"Anders\", \"Torstensson\", email = \"anders.torstensson@smhi.se\", role = c(\"aut\", \"cre\"),\ncomment = c(\"Swedish Meteorological and Hydrological Institute\", ORCID = \"0000-0002-8283-656X\")),\nperson(\"Kendra\", \"Hayashi\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0003-1600-9504\")),\nperson(\"Jamie\", \"Enslein\", role = \"ctb\"),\nperson(\"Raphael\", \"Kudela\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-8640-1205\")),\nperson(\"Alle\", \"Lie\", role = \"ctb\",\ncomment = c(ORCID = \"0009-0001-8709-4841\")),\nperson(\"Jayme\", \"Smith\", role = \"ctb\",\ncomment = c(ORCID = \"0000-0002-9669-4427\")),\nperson(\"DTO-BioFlow\", role = \"fnd\",\ncomment = \"Horizon Europe, HORIZON-MISS-2022-OCEAN-01-07\"),\nperson(\"SBDI\", role = \"fnd\",\ncomment = \"Swedish Research Council, 2019-00242\")\n)", "Description": "A comprehensive suite of tools for managing, processing,\nand analyzing data from the IFCB. I R FlowCytobot ('iRfcb')\nsupports quality control, geospatial analysis, and preparation\nof IFCB data for publication in databases like\n, ,\n, ,\nand . The package integrates with the\nMATLAB 'ifcb-analysis' tool, which is described in Sosik and\nOlson (2007) , and provides\nfeatures for working with raw, manually classified, and machine\nlearning–classified image datasets. Key functionalities include\nimage extraction, particle size distribution analysis,\ntaxonomic data handling, and biomass concentration\ncalculations, essential for plankton research.", "License": "MIT + file LICENSE", "URL": "https://europeanifcbgroup.github.io/iRfcb/,\nhttps://github.com/EuropeanIFCBGroup/iRfcb", "Config/testthat/edition": "3", "Config/testthat/parallel": "true", "Encoding": "UTF-8", "Language": "en-US", "Note": "This package includes code from https://github.com/kudelalab/PSD\nby kudelalab licensed under the MIT License.", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "Config/Needs/website": "rmarkdown", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nmake libicu-dev libpng-dev libuv1-dev libssl-dev libproj-dev\npython3 libsqlite3-dev libudunits2-dev libx11-dev zlib1g-dev", "Repository": "https://europeanifcbgroup.r-universe.dev", "Date/Publication": "2026-06-03 12:43:11 UTC", "RemoteUrl": 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